-
20Mammals
Definition of functional regulatory regions in the vast non-coding fractions of mammalian genomes remains a daunting challenge that underscores our limited understanding of... -
Comparative analysis of genome-scale, base-resolution DNA methylation profile...
We mapped DNA methylation in 580 animal species (535 vertebrates, 45 invertebrates), resulting in 2443 genome-scale, base-resolution DNA methylation profiles of primary tissue... -
RNA-Seq analysis of gene expression divergence in mammalian liver
The connection between evolution of regulatory elements and downstream gene expression is incompletely understood in mammals. We carried out a large-scale comparison of matched... -
Gut vertebrate gut archaeal community assessment via archaea-targeting 16S rR...
Commonly used 16S rRNA primers miss much of the archaeal diversity present in the vertebrate gut, leaving open the question of which archaea are host associated, the... -
Genome Skimming with Nanopore Sequencing Precisely Determines Global and Tran...
This study determines that genome skimming, shallow depth of sequencing, is capable of accurately quantifying global DNA methylation level across a range of vertebrates. -
Bottleneck_Sequencing_of_Animal_Tissue__WGS_
Study somatic mutation in animal tissues, including mutation burden accumulation through lifespan and mutational signatures. -
Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe
We obtained 249 million base pairs genomic DNA from ~5,000 year-old remains of three hunter-gatherers and one farmer excavated in Scandinavia and find that the farmer is... -
Mitochondrial heteroplasmy in vertebrates using ChIP-sequencing data
Mitochondrial heteroplasmy, the presence of more than one mtDNA variant in a cell or individual is not as uncommon as previously thought. It is mostly due to the high mutation... -
DNA Zoo
The DNA Zoo is a consortium focused on facilitating conservation efforts through the rapid generation and release of high-quality genomics resources. -
Germline mutation rate in vertebrates
We estimated the germline mutation rate of 68 species of vertebrates using WGS of pedigrees (i.e. at least 3 individuals mother, father, and their offspring). -
Saturation_Genome_Editing_of_RAD51C
Saturation Genome Editing of RAD51C. This study aims to functionally characterize saturating-levels of mutation at the RAD51C locus. We will target the Coding Sequence (CDS) and... -
Canis lupus familiaris Transcriptome or Gene expression
Identify upregulated therapeutic pathways in canine lymphoma. -
Comparative analysis of epigenomic evolution in mammals
This study used comparative epigenomic data from multiple mammalian species to investigate the roles of DNA methylation in gene evolution, species trait evolution, and genomic... -
Genotyping-by-sequencing of gray fox and other canid lineages
This project generated reduced-representation (GBS) sequencing of gray fox samples from across their range in the United States (Urocyon cinereoargenteus). Additionally, we... -
Single cell atlas for mammals, reptiles and birds
Established the broadest single-nucleus RNA sequencing study to date, covering 11 representative species, including pets (cat, dog, hamster, and lizard), livestock (goat and... -
Large scale metagenome assembly reveals novel animal-associated microbial div...
Large-scale metagenome assemblies of human microbiomes have produced a huge catalogue of previously unseen genomic data, but has been applied to only a few of the >66 000... -
Transcriptomic and lipidomic profiling of subcutaneous and visceral adipose t...
Transcriptomic and lipidomic profiling of subcutaneous and visceral adipose tissues in 15 vertebrates -
Occurrence of mammalia relicts at site Oberkassel bei Bonn
This dataset has no description
-
Occurrence of mammalia relicts at site Oelknitz
This dataset has no description
-
Occurrence of mammalia relicts at site Kniegrotte
This dataset has no description
