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Foldclass databases for protein structural domains in CATH and TED
This repository contains databases of protein domains for use with Foldclass and Merizo-search. We provide databases for all 365 million domains in TED, as well as all... -
Implementing responsible research data stewardship for the whole genome seque...
The sequencing of bacterial genomes has been crucial in our understanding of infectious disease pathogenesis and antimicrobial resistance (AMR). Bacterial whole genome... -
Dawnn benchmarking dataset: Heart cells processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn model selection and hyperparmeter optimisation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn training set simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn training code and resulting model
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Simulated branching trajectories processing and l...
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking code and results
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Simulated linear trajectories processing and labe...
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Mouse embryo cells processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Simulated discrete clusters processing and label ...
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Organoid processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Keratinocytes processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Data for manuscript 'GMP compliant isolation of mucosal epithelial cells and ...
Data points for figure 1, 2, 3, 4 and 6. GraphPad Prism 8 files -
TEM and ET datasets for: Validation of a stereological method for estimating ...
TEM images and ET z-stack (ET11) used for computing the size and density of cerebellar MFT vesicles and GC nuclei. ImageJ/Fiji particle outlines are included. -
PCD Detect: Enhancing ciliary features though image averaging and classification
A package of programs to analyse ciliary cross sections to help detect primary ciliary dyskinesia defects.
