116 datasets found

This study provides the first assessment of monitoring cultivable and viable microorganisms in a submerged aquatic analog habitat surfaces.

Microbial community analysis via high-throughput sequencing of amplified 16S rRNA genes is an essential microbiology tool. We found the popular primer pair 515F (515F-C) and...

Host-associated microbiomes provide excellent means to explore eco-evolutionary processes that influence microbiome recruitment and dynamics of species compositions. Especially...

Simulated microbial communities of Trichodesmium and heterotrophic bacteria from Gulf of Aqaba, Eilat, Israel

Simulated microbial communities of Trichodesmium and heterotrophic bacteria from Gulf of Aqaba, Eilat, Israel

This study was conducted to profile the prokaryotic diversity associated with seven different scleractinian coral species collected from the Caribbean and Pacific. In addition,...

This study is a comparison of marine environmental and marine mock community samples amplified with different versions of a commonly used universal forward primer 515. A...

Human activities are driving up atmospheric carbon dioxide concentrations at an unprecedented rate, perturbing the ocean's carbonate buffering system, lowering oceanic pH, and...

Microbial activity in the deep sea is cumulatively important for global elemental cycling yet is difficult to quantify and characterize due to low cell density and slow growth....

"Short time-scale observations are valuable for understanding microbial influence on nutrient and energy cycles. We assessed dynamics in relative abundance and potential...

The anaerobic oxidation of methane (AOM), primarily driven by anaerobic methanotrophic (ANME) archaea, plays a crucial role in consuming sedimentary methane, particularly at...

The relationship between gut microbiota, short chain fatty acid (SCFA) metabolism, and obesity is still not well understood. Here we investigate these associations in a large...

Comparative analysis of fish eDNA reveals</p><p>higher sensitivity achieved through sequence-based metabarcoding

In this study, we characterized the interactions between two bacterial strains commensals of the apple tree flowers and the floral pathogen Erwinia amylovora

The microbiome diversity of insects suggests that ticks have a wide range of bacterial symbionts that can be changed under complex ecological and evolutional circumstances. The...

We provide a snapshot of the oral microbiome throughout Spain and how it varies with life-style and other factors. Most samples come from high school students, but there are...

The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial...

A commercially-relevant reference diet and an insect meal test diet were fed to seawater-phase Atlantic salmon for 16 weeks. The distal gut microbiota from feces and mucosa were...

Analyses of environmental DNA has the potential to become an integrated tool in fish research and management. We performed a pilot study during the spring migration of fishes...

Bacteria, as the most diverse trophic group, make up the base of the marine food web. Aerobic anoxygenic phototrophs (AAP) are widespread in the environment and account for up...