36 datasets found

The aim of the study was to investigate the dynamics of bacterial communities at the beginning of a backslopping process. We analysed the relationship between community...

Short chain fatty acid profiling of ileostomy samples. 16 volunteers received yogurt, L. rhamnosus or placebo in different orders. Ileostomy samples were collected in the...

Ileostomy effluent samples were collected for metatranscriptomic profiling. The samples were collected for the INSIDE explorative diatry study. The study was aimed to...

Metataxonomic profiling (16S) of ileostomy samples. The samples were collected for the INSIDE double-blinded, placebo controlled explorative dietary study. The study was aimed...

This dataset comprises the physiological and behavioural stress response of the deep pelagic jellyfish Periphylla periphylla to anthropogenic disturbance. Specifically, we...

Until now few studies have explored the microbiomes of glass sponges (Hexactinellida). Vazella pourtalesii forms globally unique, monospecific sponge grounds under low-oxygen...

Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to...

Urban sprawl increasingly affects the ecology of natural populations, including host- microbiota interactions, with observed differences in the gut microbiota between urban and...

This dataset provides metadata of Antarctic deep-water sponges (Demospongiae and Hexactinellida) and sediment collected for microbiome analysis during expeditions PS96 (RV...

An exhaustive analysis was performed on more than 2,000 microbiota from 44 French Protected Designation of Origin (PDO) cheeses and associated milks. We characterized the...

Freshwater bodies are critical components of terrestrial ecosystems. The microbial communities living in freshwater ecosystems (as well as brackish and marine ones) are...

Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity,...

all needed meta data for bacterial composition analysis and WGS

Scripts of bacterial composition analysis and linear regression etc.

The sequences (FastA format) and annotations (GFF3 and GBK format) of 459 metagenome-assembled genomes obtained from the dental calculus of 12 Neanderthals and 52 anatomically...

Dataset associated to Dugeny, E., Lorgeril, J. d., Petton, B., Toulza, E., Gueguen, Y., and Pernet, F. in revision. Seaweeds influence oyster microbiota and disease susceptibility.