125 datasets found

BIOS-SCOPE program cast profile amplicon sequencing data

Here we perform a set of microcosm experiments to evaluate the impact of changing predator and prey concentrations on a marine protist community. We combine an estimate of...

Near-bottom abyssal zooplankton was collected with plankton pumps (63-µm) in the eastern Clarion Clipperton Fracture Zone (CCZ - 4,100 m depth), and samples were split for...

Bacterioplankton 16S rRNA genes over the continuous course of Gymnodinium catenatum blooms and two diatom (i.e., Skeletonema costatum and Chaetoceros curvisetus) blooms in...

For marine zooplankton assemblages, accurate assessment (both taxonomic composition and abundances) is a critical component of effective ecosystem-based conservation and...

mRNA from Trichodesmium colonies in the North Pacific and North Atlantic ocean was sequenced to evaluate differences in overall transcriptional patterns between Trichodesmium...

We aimed to explore the community composition and turnover of eukaryotic and bacterial microorganisms associated with ice-associated and sinking algal aggregates, as well as...

Bacterioplankton metacommunity structure across thermal effluent gradients

In this study we analyzed phytoplankton diversity in 13 environmental samples from Varna Bay (western Black Sea) by using the massively parallel sequencing (MPSS)-based...

22 environmental metagenomic surface water (20 m depth) samples from two transects to the Southern and Atlantic Ocean (RV Polarstern ANT-XXVIII/4 and ANT-XXVIII/5 in 2012)....

Zooplankton and ichthyoplankton community assessments depend on species diagnostics, yet morphological identifications are time consuming, require taxonomic expertise, and often...

Among them, the station S1-S5 (5 m, 75 m, DCM, 200 m, 500 m, 3000 m) were collected from July and August 2020 (summer), during the COMRA DY59 cruise the station W1-W7 (5 m, 100...

Microeukaryotic assemblages in the western subtropical Pacific Ocean Raw sequence reads Metagenome

This study aims at characterizing the deep sea eukaryotic diversity in the Canyon Dohrn (Thyrrhenian Sea) through DNA metabarcoding of V9-18S and 12S regions.

The 18S rRNA V9 hypervariable region was sequenced for 26 zooplankton samples collected from the Gulf of Maine, Georges Bank, and Mid-Atlantic Bight during Ecosystem Monitoring...

Sagami Bay, Japan is influenced by both warm Kuroshio current and cold Oyashio current, and rich nutrients are supplied from multiple river sources and the deep-sea, forming a...

Detection of marine organisms based on environmental DNA (eDNA) has resulted in more detailed knowledge of their diversity, distribution, and appearance patterns. In combination...

Noctiluca scintillans (red) is a widely distributed heterotrophic dinoflagellate and a prominent plankton species responsible for the red tide formation in China. In this study,...

A healthy habitat is of great significance for the fish-stock recovery. But the habitat condition of large yellow croaker (Pseudosciaena crocea), which is suffering from wide...

Planktonic copepods are a key group to understand diversity and biogeography of marine organisms. Here, we used metabarcoding approach to reveal large-scale community structure...