28 datasets found

We investigate the effect of dietary changes and environmental disturbances i.e. changes in salinity on the host-protected bacterial community of aquatic snail Ampullaceana...

This project aims to demonstrate the feasibility and reproducibility of bioassessment of organisms across the tree of life in large aquatic ecosystems using PCR-free ultra-deep...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2014-15 using three different filter setups: directly on 0.2...

Water samples were collected with free-flow niskin bottles connected to a CTD rosette. Metagenome reads were generated with Illumina HiSeq 2500. DNA and RNA were extracted using...

The following study was made in the anchialine karst cave El Aerolito, found on Cozumel Island, Quintana Roo, Mexico. It explores the relationship between wall microbial mats...

The data was collected within the framework of the BaltVib project to analyze the current pelagic and benthic composition of the microbiological community along the salinity...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2012-13 collected directly on a 3 um filter.

Water samples were collected with free-flow niskin bottles connected to a CTD rosette. Amplicon sequences of the V3-V4 hypervariable region of the 16S rRNA and 16S rRNA gene...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2014-15 collected on a 3 um filter.

High-throughput sequencing for analysis of environmental microbial diversity has evolved vastly over the last decade. Currently the go-to method for planktonic microbial...

Disease is a significant issue to aquaculture, and bacterial infections are common, yet our understanding of how fish host microbiomes interact with the bacterial diversity in...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2017 using three different filter setups: directly on 0.2...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2011-13 using three different filter setups: directly on 0.2...

This study includes surveys of microbial communities at Linnaeus Microbial Observatory (LMO) since 2011. Samples have been collected at LMO at different time intervals, 16S...

The Baltic Sea has been affected by eutrophication for several decades with the result of a gradual increase of oxygen minimum zones at the sea floor and release of phosphate...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2011-13 using three different filter setups: directly on 0.2...

Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2014-15 using three different filter setups: directly on 0.2...

Assembly of the delta smelt (Hypomesus transpacificus) genome to inform estimates of demography, domestication, migration and epigenetic studies.

Samples for the assessment of the metatranscriptome were fixed in situ and ribosomal RNA was depleted before sequencing. DNA and RNA were extracted using AllPrep DNA/RNA Kit...

Here we report a comprehensive dataset covering spatiotemporal variations in prokaryotic and eukaryotic microbial communities and physicochemical parameters in the Baltic Sea....