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Clinical isolate sequencing
Sequencing of several clinical isolates of different species -
Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substant...
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing... -
Single colony and metagenomic samples for the ReNEW publication Raw sequence ...
Single colony and metagenomic samples for the ReNEW publication Raw sequence reads -
Under Counting of Total Yeast and Mold on Cannabis using DRBC
We compare quantitative polymerase chain reaction with colony forming units derived from three different plating medias. PDA, PDA with chloramphenicol and DRBC with... -
Bacteria Genome sequencing and assembly
Whole genome sequencing of the type strains of bacterial species associated with fish disease. -
Isolates recovered from wastewater in Ontario Canada Raw sequence reads
Isolates recovered from wastewater in Ontario Canada Raw sequence reads -
Metagenomic survey and whole genome sequencing of antimicrobial resistant bac...
The purpose of this project is related to metagenomic survey and genomic epidemiology analysis of antimicrobial resistance bacteria (in particular, carbapenem and/or beta-lactam... -
Bacteria isolated from rhizosphere and plants: Genome sequencing and assembly
Various bacterial isolates from rhizosphere. Some strains isolated from hop cones. Genome assemblies will be used for comparative genomics across different bacterial lineages. -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
Characterization of antimicrobial and antibiotic resistance in wastewater pri...
Metagenomic and genome sequences from samples collected from the primary effluent of wastewater around Baltimore, MD. -
bacterial multiDAP
Escherichia coli and Pseudomonas simiae transcription factor binding sites mapped in 48 bacterial genomes -
soil bacterial isolates
The different 122 bacteria isolated from soil aggregates under three fertilizer treatments -
Genomic epidemiology and patterns of antimicrobial resistance of neonatal sep...
The level of antibiotic resistance in neonatal infections and its impact on mortality in low-middle income countries (LMICs) is unacceptably high. The study, entitled the Burden... -
WGS of bacteria isolated from seafood products
WGS of bacteria isolated from seafood products -
16S rDNA
16S rDNA -
CVM NARMS Retail Seafood Isolates
Whole genome sequencing of foodborne pathogens isolated from retail seafood as part of the US Food and Drug Administration surveillance project for NARMS -
Pakistan and United States ICU transmission dynamics
Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of bacteria contaminating hospital intensive care unit surfaces in two... -
Vet-LIRN-Other-GU
Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria -
Enhanced detection system for hospital associated transmission (EDS-HAT)
Whole genome sequencing of bacterial pathogens is combined with machine learning and data mining of the electronic medical record to enhance outbreak detection in hospitals and...