8,053 datasets found

Amplicon sequence analysis of Geoje-Hansan Bay sediment in Korea

Bacteria dynamics during decomposition of cyanobacterial derived particulate organic matter

Molecular epidemiology based on whole-genome sequencing and comparative genomic analysis of non-O1, non-O139 Vibrio cholerae in India

Samples were collected and sequenced from five locations along Kuwait coast in autumn (October) and in spring (April). The study aimed to use metagenomic 16S rRNA high...

Diversity of nitrogenase gene sequences in Atlantic waters

Microbial community in the Yellow Sea, China

Whole genome shotgun sequencing of Methanofollis formosanus ML15

This dataset is a pool of 4 marine bacteria that was sequenced 10 times independently over 2 years on the V3V4 region. This community is composed of Porphyrobacter sanguineus...

Seawater samples were assessed for diazotroph communities in epi- and mesopelagic layers using amplicon sequencing, comparing two primer sets targeting the nifH gene.

normal High-throughput sequencing of bacteria, microeukaryotes and zooplankton

Ribosomal iTag of marine microbial communities from Oxygen Minimum Zone in South Atlantic Ocean. Sample collected during DeepDOM expedition on board R/V Knorr

In order to investigate cellular and molecular mechanisms involved in symbiosis of scleractinian corals with photosynthetic dinoflagellate algae using in vitro system, our...

This study aims to determine protist community structures using illumina MiSeq paired-end sequencing (for 18S rDNA) in the East China Sea.

Marine ecosystems are distinctive ecological niche, with a variety of microbes playing important roles in nutrient recycling and other ecological processes, thereby requiring a...

This dataset was collected during 21 deep-sea expeditions. It includes amplicon raw sequence reads (V3V4 region 16S rRNA gene survey) of seawater, sediment, and deep-sea...

Shewanella sp. : Genome sequencing

Bacterial community diversity of seawater in East China Sea

Time series sampling was conducted about every 2 hours for 3 days (28-31 October 2021), with 3 parallel ABC samples spaced 500 meters apart by equal triangle.

The environmental DNA was used as PCR template and bacterial 16S rRNA genes were amplified using primers 338F and 806R targeted the V3-V4 regions of the 16S rRNA genes used for...

we report archaeal community structure in the western North Pacific and the Arctic Ocean based on the deep sequencing of 16S rRNA genes directly amplified from seawater filtrates.