8,053 datasets found

We sequenced 20 environmental bioluminescent bacteria isolated from shore seawater of several oceans and seas around the world, including reference strains from the NCCB...

The main objective of this project is to obtain new knowledge on temporal patterns of marine parasitism in the coastal zone, beyond the peak of infections in host blooming...

A comparative analysis of error profiles from 12 different DNA polymerases was performed and experimentally assessed in parallel by Illumina Miseq.

Coral microbial communities from La Bocana, Puerto Morelos, Mexico Ribosomal iTag

The microbiota of five coral species (Veretillum cynomorium, Alcyonium acaule, Paramuricea clavata, Eunicella cavolini and Savalia savaglia) living in the Sea of Marmara were...

NGS reads of LR-PCR mitogenomes of Perumytilus purpuratus

Sequence reads for transcriptome assembly

Accumulation of marine plastic debris is an emerging and worsening man-made problem. It is not only becoming an ecological threat to marine animals but could also facilitate the...

Samples collected from West Antarctic Peninsula and amplified using COI Leray-XT primers. Data from Angulo-Preckler et al. (in preparation)

In this study, we used 16sRNA sequencing to characterize the bacteriota of four trematode species that use the same snail species as intermediate host (Zeacumantus...

These raw read have been generated from samples collected during the NBP19-10 cruise along the Western Antarctic Peninsula (Antarctica) between October and November 2019. RNA...

Viral metagenomes from sea star tissue of Asterias forbesi

Ecological baselines for the structure and functioning of ecosystems in the absence of human activity can provide essential information on their health status. The Glorieuses...

Fungal diseases emerging worldwide. Among Candida species antifungal resistance becoming a large danger. C. parapsilosis is one of the causative agents of candidiasis and this...

The taxonomic and functional composition of the eastern oyster microbiome was profiled by amplicon sequencing targeting the V4 region of the 16S rRNA gene and shotgun...

identification of non indigenous species using metabarcoding (18S rRNA and mitochondrial cytochrome oxidase I) in Tahiti ports and marinas.

Diversity of bacterial communities

ChIP-seq analysis of H3K4me2 and H3K4me3 methylation in Magnaporthe oryzae. Comparison of two fungal developmental stages, vegetative mycelia and germination tubes.

Single-cell transcriptome sequencing of gregarines to reconstruct plastid evolution in apicomplexans

To understand the origins and genetic evolution of the Yemen cholera outbreak strain, we sequenced 42 Yemeni isolates, as well as 74 recent seventh pandemic V. cholerae O1 El...