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Projet ECOSFIX : Données extraites de la Base de données (NoSQL)
Le Projet ECOSFIX vise à structurer, homogénéiser, gérer et analyser des données permettant de déterminer comment un type de forêt affecte les traits physiques et fonctionnels... -
Data from: Nonlinear Effects Induced by Interactions among Functional Groups ...
Data and R-code used in the paper Nonlinear Effects Induced by Interactions among Functional Groups of Bacteria and Fungi Regulate the Priming Effect in Malagasy Soils, by... -
Projet ECOSFIX : Structure des Bases de données (SQL) relationnelle et non re...
Base de données ecosfix SQL mais avec une structure non relationnelle (redondance de champs). -
kmer dictionaries and associated scripts for kmer contaminant detection in Dr...
The compressed archive contains material for performing kmer-based contaminant screening of Drosophila suzukii (or other related Drosophilid species) sequencing data using Clark... -
Ecological and phenotypic trait dataset for 12 European forest tree species f...
GenTree is a European Union project financed under the Horizon 2020 framework (2016-2020). The goal of GenTree was to improve the status and use of European in-situ and ex-situ... -
Plant Health Risks Identification from textual data
This corpus is created as part of the BEYOND project. It contains 23 texts annotated for the Named Entity Recognition (NER) and Named Entity Normalisation (NEN) tasks. The... -
R ressources improve dendrograms
R programms to improve dendrogram drawing -
Supplementary tables for chapter 2 of manuscript: "Carrot populations in Fran...
Supplementary data of Chapter 2 of manuscript titled: "Carrot populations in France and Spain host a complex virome rich in previously uncharacterized viruses" Table S1:... -
MAGATT - Marker Assisited Gene Annotation Transfert for Triticeae
Test data for the MAGATT pipeline. Source code: https://forgemia.inra.fr/umr-gdec/magatt Documentation: https://umr-gdec.pages.mia.inra.fr/magatt/ -
Données de l'enquête ADBU sur l'organisation des services à la recherche en b...
La commission Recherche et Documentation de l’ADBU s'intéresse à l’organisation des services à la recherche en bibliothèque depuis 2018. Un questionnaire avait alors été... -
SicpaOpenData for Python
The Sicpa_OpenData libraries facilitate the publication of data to the INRAE dataverse in a transparent way 1/ by simplifying the creation of the metadata document from the data... -
XSens Expressive Motion (XEM) dataset
The XSens Expressive Motion (XEM) dataset is a dataset for detecting basic emotions from body movements while performing a set of predefined actions. For more explanations on... -
Triticum aestivum trait Corpus
The Taec corpus is a dataset of 540 Pubmed abstracts about bread wheat with manual annotations of species, phenotypes, and traits in the BioNLP-ST format. It is intended to... -
ICEscreen
ICEscreen is a bioinformatic pipeline for the detection and annotation of ICEs (Integrative and Conjugative Elements) and IMEs (Integrative and Mobilizable Elements). -
Quality trimmed dsRNA and VANA data for synthetic viral communities of varyin...
HTS data for synthetic viral communities of varying complexity (5-, 10-, 20- and 60-viruses). This dataset is composed of 47 fasta files: - 22 VANA - 22 dsRNA - 3 controls... -
Meloidogyne enterolobii scripts
The codes used to run the different tools listed in the methods of the paper "High-fidelity annotated genome of the polyploid and quarantine root-knot nematode, Meloidogyne... -
TransformON
TransformON est une ontologie de domaine s'appuyant sur le modèle core PO2 qui permet de décrire les procédés de transformation et la caractérisation des produits issus de la... -
MRI images of potato tubers during storage
This dataset contains MRI images in DICOM format (consisting of a header with acquisition parameters and image data sets packed into a single file) that support the findings of... -
Gene Regulation Network
Gene Regulation Network (GRN) is a set of sentences from PubMed abstracts manually annotated for training and evaluating Information Extraction systems. The sentences were... -
ISO-seq Minc transcripts containing the repeat and matching the genome
We used the publicly available data of IsoSeq sequencing of Meloidogyne incognita (available under NCBI accessions PRJNA787737, SRP350177. The data were obtained using a mix of...