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CephBase
A database-driven web site on all living cephalopods (octopus, squid, cuttlefish and nautilus). Contact at cephbase@hotmail.com -
DMP of GenoToul Bioinfo facility
The data management plan of the infrastructure concerns three types of data: • Data-U: user data stored on working spaces assigned to user and project accounts. •... -
Brassicaceae transposable elements copies and Arabidopsis thaliana annotations
The Brassicaceae TE copies from Arabidopsis thaliana Col-0 ecotype, Arabidopsis lyrata, Capsella rubella, Arabis alpina, Brassica rapa and Schrenkiella parvula, used for Duster... -
DATASET SOFA
SOFA DATASET OF ICUs PATIENTS -
Genome reconstruction of the non-culturable spinach downy mildew Peronospora ...
Peronospora effusa (previously known as P. farinosa f. sp. spinaciae, and here referred to as Pfs) is an obligate biotrophic oomycete that causes downy mildew on spinach... -
STRAP
This research project aimed to safely reduce antibiotic prescriptions in children under five suspected of a lower respiratory tract infection (RTI) at the emergency department... -
Using distant supervision to augment manually annotated data for relation ext...
This is the data for the paper "Using distant supervision to augment manually annotated data for relation extraction" Significant progress has been made in applying deep... -
Mite Diet Sequences Obtained by High Throughput Sequencing of Gut Contents of...
Cytochrome oxidase subunit I (COI) barcode sequences in this file were obtained from gut DNA extracted from 54 freshly collected water mites, comprising 21 Lebertia... -
Simulate Gene Expression Profiles from a linear Combination of Maotif Acitivi...
Cellular identity and behavior is controlled by complex gene regulatory networks. Transcription factors (TFs) bind to specific DNA sequences to regulate the transcription of... -
Analyse dose response for gene expression and phenotype
The rise of high-throughput methods has allowed for screens with millions of single compounds and thousands of (binary) compound combinations. Investigating compounds in... -
STRAP
This research project aimed to safely reduce antibiotic prescriptions in children under five suspected of a lower respiratory tract infection (RTI) at the emergency department... -
CephBase
A database-driven web site on all living cephalopods (octopus, squid, cuttlefish and nautilus). Contact at cephbase@hotmail.com -
Educational dataset: Application of long read sequencing to determine express...
The dataset is created for use in the teaching of the undergraduate course BINF200 - Analysis of Biological Sequences and Structures, first used in Autumn 2023. The dataset... -
Simulation of adaptive immune receptors and repertoires with complex immune i...
Data used in the manuscript "Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine... -
Specificity of Loxosceles alpha clade phospholipase D enzymes for choline-con...
This dataset contains molecular dynamic simulation data of Loxosceles phospholipase D enzymes, of both clades, in presence of different bilayer compositions. The enzymes... -
2016_Tiwari_Reuter_TIMs_PlosCB
raw experiment data, source code, figures, manuscript and other relevant documents for the publication -
Data used in the article "Profiling the baseline performance and limits of ma...
All the input data required for simulating the immune state-associated signal and subsequent machine learning model training used in the article "Profiling the baseline... -
2014_Tiwari_Fuglebakk_etal_BMC_Bioinfo
original experiment data, documents, manuscript for the publication -
Code and software used in the article "Profiling the baseline performance and...
This upload contains all the code and software used in the manuscript "Profiling the baseline performance and limits of machine learning models for adaptive immune receptor...